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Organisms
5090
Proteins
24.6 mio
Interactions
>2000 mio
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Protein by name
Protein by sequence
Multiple proteins
Multiple sequences
Proteins with Values/Ranks
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Protein families ("COGs")
... by family name
... by protein name
... by protein sequence
... multiple protein names
... multiple sequences
Examples
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Protein Family by Name
Protein Family Name:
(examples: #1 #2 #3)
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Protein Families by Multiple Names
List Of Names:
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Organism:
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Protein Families by Multiple Sequences
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(examples: #1 #2)
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Protein Family by Protein Name
Protein Name:
(examples: #1 #2 #3)
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Protein Family by Protein Sequence
Amino Acid Sequence:
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Examples and Highlights
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FAA4 and its ten most confident interactors.
FAA4 in yeast is a long chain fatty acyl-CoA synthetase; see it connected to other synthetases as well as regulators.
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The 20 most frequently mutated human cancer genes.
These have a higher-than-expected degree of interconnectivity, and are enriched in characteristic molecular functions.
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A poorly characterized protein from Methanosaeta.
It has no annotated domains or functions, but shows some intriguing connections to possible DNA-replication or -repair proteins.
Multiple Proteins by Names / Identifiers
List Of Names:
(one per line; examples: #1 #2 #3)
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Multiple Proteins by Sequences
Amino Acid Sequences:
(examples: #1 #2)
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Organisms and Clades
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Proteins with Values/Ranks - Functional Enrichment Analysis
Submit your entire experiment as a list of proteins - no cutoffs.
Behind each protein, put a meaningful value for ranking (fold-change, log-pvalue, abundance, ...).
Proteins with Values:
(one per line; examples: #1 #2 #3)
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Advanced Settings:
FDR, ordering ...
FDR stringency:
high (1 percent)
medium (5 percent)
lenient (25 percent)
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enrichment score
significance
pathway size
allow anonymized, aggregated use of this data to help us improve
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Single Protein by Name / Identifier
Protein Name:
(examples: #1 #2 #3)
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Single Protein by Sequence
Amino Acid Sequence:
(examples: #1 #2 #3)
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